CUrriculum

Monday. 9.30 - 17.30

 

     Logging on to Your Personal Cloud Image

     Introduction to Linux – an environment for Bioinformatics

     Docker and Singularity for reproducible bioinformatics

 

 

Tuesday. 9.30 -17.30

 

     NGS data and Quality Control - How well did my sequencing run work?

     Genome Assembly and annotation

     Biological databases - Where does our reference data come from?

 

 

Wednesday. 9.30- 17.30

 

     Genome visualisation and assembly quality assessment

     Working with long read data - Nanopore Correction and hybrid assemblies

 

Thursday. 9.30 -17.30

 

     RNAseq and Transcriptomics

     Reference versus de novo RNAseq

     Differential Gene Analysis

 

 

Friday. 9.30 -17.30

    Phylogenetics and Phylogenomics - - from genomes/transcriptomes to species trees