17-21 April 2023
To foster international participation, this course will be held online
Recent bioinformatic developments now allow the recovery of metagenome-assembled genomes (MAGs) at an incredible depth.
We assume some basic awareness of analysis of UNIX and molecular biology.
Monday - 9 am -4 pm Berlin time
Introduction to metagenomics
Working with the command line
QC and trimming
Tuesday - 9 am -4 pm Berlin time
Read-based analyses
Taxonomic annotation of metagenomes
Functional annotation of metagenomes
Wednesday - 9 am -4 pm Berlin time
Metagenome assembly
Assembly QC
Thursday - 9 am -4 pm Berlin time
Genome-resolved metagenomics in anvi'o
Friday - 9 am -4 pm Berlin time
Annotation of metagenome-assembled genomes (MAGs) and downstream analyses
Cancellation Policy:
> 30 days before the start date = 30% cancellation fee
< 30 days before the start date= No Refund.
Physalia-courses cannot be held responsible for any travel fees, accommodation or other expenses incurred to you as a result of the cancellation.